Catalog · Ontology

Laboratory Assay Ontology

openworld-examples/lab-ontology@0.1.0 example6 termsvalidschema

Size: 6 terms · no sample data

Laboratory assay vocabulary used by the Assay Optimization World.

Scope

Classes and properties for assay plates and their wells: the campaign a plate belongs to, the control role of each well, and the reagent lot used. Used by examples/research/assay-optimization-world as the T-box of its plate graph.

Sources

The terms are defined in this package (semantics/core.yaml). No other ontology is imported or mapped.

Use it for

  • Serve as the T-box for a plate graph of plates and wells.
  • Find the wells on a campaign's plates, with each well's control role and reagent lot.
  • Give the plate graph and the World a shared name for plates, wells, campaigns, controls, and reagent lots.

Limitations

  • The IRI is illustrative and is not resolvable.
  • Only plates and wells are covered. Assays, instruments, experiment runs, measurements, and protocols have no terms here.
  • No SHACL shapes or mappings to other vocabularies are included.

Versions

  • 0.1.0: first public example.

Namespaces

l: = https://w3id.org/openworld-examples/lab#. The IRI is illustrative and is not resolvable.

Files

  • semantics/core.yaml — schema in the OWP YAML format (SemanticProfile)

Assets

PathKind
semantics/core.yamlSemanticProfile

Open World Package · https://github.com/ontle-world/open-world-package